def count_nuc(nucs): cnt = {} cnt['A'] = 0 cnt['C'] = 0 cnt['G'] = 0 cnt['T'] = 0 for nuc in nucs: cnt[nuc] += 1 return cnt def RNA_Transcription(rna): dna = '' for nuc in rna: if nuc == 'T': dna += 'U' else: dna += nuc return dna def Reverse_Complement(dna): rc_dna = '' com = {'G': 'C', 'C': 'G', 'A': 'T', 'T': 'A'} for nuc in dna: rc_dna = com[nuc] + rc_dna return rc_dna # Task 1 #cnts = count_nuc('CGCATTTCTAGCATGTATCTATGGCACCCTGCTTTGGTGACGATGTATAGGATTATGTTCAGATACTTTACCCTGAGTGAACGGCGCTGAACGGTGCCTTTATATTTGCGTATTGGAAGTTTAATTACCTCCATTCGAATGTAAAATACCCGAGTACGAAAAGAACCATCACGAGCCTTCAGTCTGAAAGCCGGGTCGTGCACGAGCTTGACTGTGTCCTGTACGACATCCCAAACTAATTGCATGGCGCCAGGGTTCGGTTTAACGGCTGGTGGACCGCGGGCCTAAGAGTTCATTAGCCCGGCTTGCGTGCCGAACACAATAAGAAGCCCTTCTCCAATCTGCCTCGCGGATTGTGAACACCTTCTGTAGTGTTGAAAGTCGCCGTATTACTGAGAAAGCCTCCACATACGTCAGGGCTGGAGCTAATAGCACGGTCGGAGAGATCATGGGGGTGCTAGAGGTAAATATACCGAGCGTTCTACACGGTCTTGCGCCCGTCAATATGTGCTCGTTAGTTCCCGGATAAGCTAACGCTGAGAGAATATACAGCATTCGGGTCTACGGCTTTATTTCACATTTCCAGCCCAATGAAACGGACGAGCACGGGCAGTTATGATTCGGCACGTAGGGAGGTCAAGTCAAGCTAATGGAATCATCCAGTCAGGATGGAATTCTGATAACGAGACAGGCATTACGCGTAATCAGTGTTTGTAAGTTCTTACGTGACCTTAGCGGGCCCTCGTGCGTACCGGCCGGGAGACTTATATATAACGCATTCACTATTCCTAACCACTTAGCGTAGTCCGGTACGCAGCGCTAATCGTCGTAAGGAAGTTGGTTCGTCTGACAGCGTATAAGTCGCGACC') #print cnts['A'], cnts['C'], cnts['G'], cnts['T'] # Task 2 #print RNA_Transcription('TTCTGACTAGCACCTCGTTGAATGAGCGCTTATCAGAAAGGGCAGTCGTCCCGCCGAGGAAAGACACCTGGCCGAAGTTCAAGTATGAATTTAATAGTTCGTTATTCACCCCAACCTGTCCAGAAACGCGTCCCTCAGGCTCATGGACCATAGTCTCCCCGACAGGGTAGATCTGCCCCACCCCGCACTCATGAATATACGCCATATTGTACTCGGTCCGAATGGAGGTGAGTGCTAGTTCAGGGCCGAGGAATCTGGATCGCCTAGAGGAAGTTGAATATTTTCGCCAGGAATGGATAGGCACTACCTATTCGTCAGTCACCGTCAGGGACCAACGGGAATCTCGGTAGTGGGTGCTCACAGCTAGTAGCGTCTGGTCACGGGACCTTGAATGGTGCCGTCTTTGCTAAAGCAGCTTCTCCTTACAGTCCTGAATACGAGAGTCGCGGAGCGGGCGACGCGCAGTGGGCAACCGCGCGGTGGATCCGTCTACTCTATTCATGCCTGAGTTGGTGGTGACACGACGTAAGAACTTGAAATCCTGATCGGGCGGGGCGTTGACCGTAAATCGCTACGGTGTGGTTTGTAATTGTTAAGTGGAATGGATGCGGGGTGCGGGATGACCTAAGCCTAGGAAATCAATTTCGTGTGCTCACACATACGGTGTGCCACTTAGACATAGAGTTAACTGACCGGTGTTTCACCTTCAGAGCAGACTTTTCAGCCTTTACATCGCATAATAGAACCGTGCCTCGAGGCCCGTCTCCAAAACGCGTTTATAGTTTTACTGGTTAGTCCGGGCGGGGGGTCTATGTAGTTCAAAGGCCGAAGCCGGGACAGTCCGTGCGACGTGCTACCTAATTTCGTGCAATTTTCGGAACGATAGCTTGACCTTTTCTCGGAGTCTTGGGTTCTCTTAGTCAATCTCGGTTCCGACACTTTCTGGGTTCGCTGAGCTCCACGTGGACACCTGAGTTGCCAGAGTGCGGCCGTACTG') #Task 3 print Reverse_Complement('TCGAAAGACGAAGCGATGGACACGTCTAACGACTATGGAATAGACTTTTCTAGATGAAAGTAAGATCACTGTGTAGCCGGAGCTAGTCTGGACCACTAGTGTTGTCACGAACAGCTGGTCGCGATGCCATCTTGGCCCCCAACCCTCCTAATTGTCGCACCCCTAGATAATCGCCGTCCACACAGACGAGACCAATGGTCCCGACGACATCATTGAGGAAAATGCAGCTTCAATCTAGTGTGCTAAAGGTAAGTAGGTGAGCTCCACCGGGTATTACAGTCTAAGTCCTTGGTGATCTGTATAGTGAGCAATGGAGCAACCTAAATCCCACCGTCTCGATTTCCTGTACGGTAATTGCGATGGAAACCATCCGAAGTTGCCGAGAGCCGGGAGTACTCGACTAGGTACTTACCCAAAGGCAGAGCATTTGACACGTGTAGCTGCGCTGATTCCACATCCATGTTAGTTATTCCAAGGTGTCCCAATAGACGCATGGCTAGGCAACCACGTCCATAGAACCGGGCGGTCAACTAGTCGCTGATGGACGAGCCATGCCGACCCCCGTTATTAGGTACCGTGCGTATGGACTTACGTTGTGCTCTAGTCGCATACCACGGCTGCCGAAACTACGCTCCTTTCGCATAGCGGATGGGCTTTTTCGTCCCAGTCAAAGTCCCGCTCAATTGATGATGAGGCACACACAGCGAGTGAAGCACTGTGGGCGCCGGCGTCACGGAGTACCATTTAGCCATTGAGCTAAGTAAGCTCACCATGGAAATACGACATCTTCAAATGTGAAGCCTACGGGTTTAATGCCATACCACTCTGAAGGC')
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